HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000049958
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Short Name: UBP26
Description: Belongs to the peptidase C19 family
Maps and Mapping Data
Chromosome Start End Strand ID
8 64252019 64257895 + gene:ENSEOMG00000049958
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.63 26,465.06 Da 55.48 65.95 -0.70
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01795 Ubl_USP48 117 225 1.42702E-27 IPR044743
SUPERFAMILY SSF54236 Ubiquitin-like 125 195 9.67E-10 IPR029071
Gene3D G3DSA:3.10.20.90 - 111 193 6.4E-7 -
MobiDBLite mobidb-lite consensus disorder prediction 109 130 - -
Gene Ontology
Biological Process:
GO:0016579 (protein deubiquitination)
Molecular Function:
GO:0004197 (cysteine-type endopeptidase activity) GO:0004843 (cysteine-type deubiquitinase activity)
KEGG Pathway
KO Term:
K11858 (ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12])
Best hit
Source Best Hit ID Description E-value
TAIR AT3G49600.3 - 0
RefSeq XP_021715912.1 ubiquitin carboxyl-terminal hydrolase 26-like [Chenopodium quinoa] 0
Swiss-Prot Q9SCJ9 Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana OX=3702 GN=UBP26 PE=1 SV=3 0
TrEMBL A0A803MEY4 ubiquitinyl hydrolase 1 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg17178
Aizoaceae Mesembryanthemum crystallinum 1 gene_13044
Amaranthaceae Atriplex hortensis 1 Ah034200
Amaranthaceae Beta vulgaris 1 BVRB_2g035690
Amaranthaceae Salicornia bigelovii 2 Sbi_jg20640, Sbi_jg23119
Amaranthaceae Salicornia europaea 1 Seu_jg16977
Amaranthaceae Suaeda aralocaspica 1 GOSA_00009213
Amaranthaceae Suaeda glauca 2 Sgl63426, Sgl67905
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000018277, gene:ENSEOMG00000019796 ...
gene:ENSEOMG00000019847, gene:ENSEOMG00000049036, gene:ENSEOMG00000049958
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.2AG0012660, CQ.Regalona.r1.2BG0014390
Anacardiaceae Pistacia vera 2 pistato.v30136320, pistato.v30180000
Apiaceae Apium graveolens 1 Ag9G02703
Arecaceae Cocos nucifera 1 COCNU_03G003650
Arecaceae Phoenix dactylifera 1 gene-LOC103708645
Asparagaceae Asparagus officinalis 1 AsparagusV1_08.2796.V1.1
Asteraceae Flaveria trinervia 1 Ftri14G05915
Brassicaceae Arabidopsis thaliana 1 AT3G49600.1
Brassicaceae Eutrema salsugineum 1 Thhalv10010085m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp5g12510.v2.2
Brassicaceae Brassica nigra 2 BniB06g010130.2N, BniB08g063250.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq04G2222
Casuarinaceae Casuarina glauca 1 Cgl04G2418
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno08g01450, gene.Cymno11g09630
Dunaliellaceae Dunaliella salina 1 Dusal.0436s00003.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate04g14370, gene.Thate05g04520
Nitrariaceae Nitraria sibirica 1 evm.TU.LG07.1637
Plantaginaceae Plantago ovata 1 Pov_00020522
Plumbaginaceae Limonium bicolor 2 Lb1G04447, Lb6G31044
Poaceae Echinochloa crus-galli 3 BH05.3495, CH02.684, CH05.3639
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_4AG0310280, gene-QOZ80_4BG0341480
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.4HG0400350.1
Poaceae Lolium multiflorum 1 gene-QYE76_060535
Poaceae Oryza coarctata 2 Oco05G005180, Oco06G005350
Poaceae Oryza sativa 2 LOC_Os03g09260.1, LOC_Os03g09270.1
Poaceae Paspalum vaginatum 1 gene-BS78_08G072200
Poaceae Puccinellia tenuiflora 1 Pt_Chr0105901
Poaceae Sporobolus alterniflorus 4 Chr23G008620, Chr25G007020, Chr26G011120, Chr30G006930
Poaceae Thinopyrum elongatum 1 Tel4E01G450300
Poaceae Triticum dicoccoides 2 gene_TRIDC4AG005350, gene_TRIDC4BG046240
Poaceae Triticum aestivum 3 TraesCS4A02G038800.2, TraesCS4B02G267000.2 ...
TraesCS4D02G266600.2
Poaceae Zea mays 2 Zm00001eb008340_P001, Zm00001eb310400_P002
Poaceae Zoysia japonica 2 nbis-gene-5296, nbis-gene-57040
Poaceae Zoysia macrostachya 1 Zma_g21633
Portulacaceae Portulaca oleracea 2 evm.TU.LG07.163, evm.TU.LG15.35
Posidoniaceae Posidonia oceanica 1 gene.Posoc08g03150
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_7_RagTag.1122
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-18724, nbisL1-mrna-9609
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-5570
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-13111
Rhizophoraceae Kandelia candel 2 evm.TU.utg000002l.424, evm.TU.utg000018l.598
Rhizophoraceae Kandelia obovata 1 Maker00012079
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-8121
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-9819
Salicaceae Populus euphratica 3 populus_peu14749, populus_peu14751, populus_peu32430
Solanaceae Lycium barbarum 1 gene-LOC132637467
Solanaceae Solanum chilense 1 SOLCI004126000
Solanaceae Solanum pennellii 1 gene-LOC107015260
Tamaricaceae Reaumuria soongarica 1 gene_8572
Tamaricaceae Tamarix chinensis 1 TC02G1150
Zosteraceae Zostera marina 1 Zosma01g10150.v3.1
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