Basic Information
Locus ID:
gene:ENSEOMG00000049597
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 70910723 | 70912769 | + | gene:ENSEOMG00000049597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 35,391.98 Da | 31.68 | 66.76 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 1 | 105 | 6.40967E-30 | IPR033734 |
| CDD | cd09612 | Jacalin | 175 | 303 | 1.28905E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 172 | 303 | 3.9E-33 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 2 | 105 | 7.0E-21 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 161 | 302 | 2.88E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 2 | 104 | 8.9E-26 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 1 | 105 | 1.8E-30 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 152 | 303 | 3.7E-55 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 172 | 304 | 2.3E-45 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 1 | 106 | 3.9E-8 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 161 | 304 | 51.874294 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 1 | 106 | 32.581284 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021759624.1 | uncharacterized protein LOC110724509 [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG9 | DYW_deaminase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology