Basic Information
Locus ID:
gene:ENSEOMG00000049325
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 8 | 1791334 | 1795446 | - | gene:ENSEOMG00000049325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 32,757.55 Da | 46.10 | 55.21 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 223 | 281 | 1.9E-25 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 40 | 121 | 3.8E-19 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 175 | 218 | 6.8E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 175 | 224 | 2.64E-10 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 37 | 111 | 3.27E-17 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 112 | 169 | 5.49E-19 | IPR037275 |
| Gene3D | G3DSA:2.20.28.10 | - | 247 | 284 | 2.2E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 170 | 221 | 2.5E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 176 | 218 | 6.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 176 | 219 | 12.149959 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 33 | 109 | 25.768795 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 111 | 175 | 33.986435 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25560.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_021758065.1 | probable E3 ubiquitin-protein ligase RZFP34 [Chenopodium quinoa] | 0 |
| Q5JL96 | Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica OX=39947 GN=RZFP34 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QPK0 | RING finger and CHY zinc finger domain-containing protein 1 OS=Spinacia oleracea OX=3562 GN=SOVF_155740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology