Basic Information
Locus ID:
gene:ENSEOMG00000048794
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
PMM
Description:
in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 4728582 | 4734521 | + | gene:ENSEOMG00000048794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 33,090.43 Da | 41.74 | 84.73 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02585 | HAD_PMM | 52 | 286 | 1.79285E-133 | IPR005002 |
| Pfam | PF03332 | Eukaryotic phosphomannomutase | 72 | 287 | 2.4E-106 | IPR005002 |
| SUPERFAMILY | SSF56784 | HAD-like | 53 | 286 | 6.01E-62 | IPR036412 |
| Gene3D | G3DSA:3.40.50.1000 | - | 52 | 283 | 3.2E-109 | IPR023214 |
| Gene3D | G3DSA:3.30.1240.20 | - | 130 | 231 | 3.2E-109 | IPR043169 |
| TIGRFAM | TIGR01484 | HAD-SF-IIB: HAD hydrolase, family IIB | 53 | 266 | 2.0E-27 | IPR006379 |
| SFLD | SFLDF00445 | alpha-phosphomannomutase | 47 | 287 | 0.0 | IPR005002 |
| SFLD | SFLDS00003 | Haloacid Dehalogenase | 47 | 287 | 0.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00051 (Fructose and mannose metabolism)
map00051 (Fructose and mannose metabolism)
ko00520 (Amino sugar and nucleotide sugar metabolism)
map00520 (Amino sugar and nucleotide sugar metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45790.1 | phosphomannomutase. encodes a phosphomannomutase, involved in ascorbate biosynthesis | 0 |
| RefSeq | XP_021737092.1 | phosphomannomutase-like [Chenopodium quinoa] | 0 |
| A0A0K9RL25 | Phosphomannomutase OS=Spinacia oleracea OX=3562 GN=PMM PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MWZ0 | Phosphomannomutase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg26861, jg29650 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23293 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah036085 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g170670 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39971, Sbi_jg55301 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14363 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00011108, GOSA_00014121, GOSA_00014122 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41841, Sgl46641 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018611, gene:ENSEOMG00000035043 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1AG0021990 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30004080 |
| Apiaceae | Apium graveolens | 1 | Ag6G00164 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G007430 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103719400 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_01.901.V1.1, AsparagusV1_06.1267.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G28088, Ftri3G17219 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G45790.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001604m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g27860.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g001280.2N, BniB06g004180.2N, BniB08g029880.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq03G2764, Ceq05G0146 |
| Casuarinaceae | Casuarina glauca | 5 | Cgl03G2507, Cgl03G3001, Cgl03G3002, Cgl05G0150, Cgl05G1288 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g00660 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0091s00023.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g28220, gene.Thate03g09230 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6128, nbisL1-mrna-9495 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.899 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032050 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G11031 |
| Poaceae | Echinochloa crus-galli | 8 | AH09.2742, BH09.2987, CH02.1612, CH02.1620, CH04.1178 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0299070, gene-QOZ80_4BG0329750 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0213480.1, HORVU.MOREX.r3.4HG0395170.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_047618, gene-QYE76_047683 |
| Poaceae | Oryza coarctata | 2 | Oco07G019550, Oco08G018820 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g58580.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G008800, gene-BS78_06G287500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307088 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G010870, Chr12G026040, Chr23G000680, Chr25G000510 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G976000, Tel4E01G410700 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG078810, gene_TRIDC2BG086970 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2B02G599300.1, TraesCS2D02G593400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb065790_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18035 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20708 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG19.965, evm.TU.LG24.968 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g04790 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.293 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10870 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11137 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.289, evm.TU.utg000006l.558 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009354, Maker00013373 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9213 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7010 |
| Salicaceae | Populus euphratica | 2 | populus_peu27736, populus_peu27737 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132600003, gene-LOC132640627 |
| Solanaceae | Solanum chilense | 3 | SOLCI001068600, SOLCI001178800, SOLCI004055600 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107018662, gene-LOC107019957, gene-LOC107026845 |
| Tamaricaceae | Reaumuria soongarica | 3 | gene_1447, gene_15243, gene_15244 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2179 |
| Zosteraceae | Zostera marina | 1 | Zosma01g35290.v3.1 |