Basic Information
Locus ID:
gene:ENSEOMG00000048466
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 71730171 | 71734345 | - | gene:ENSEOMG00000048466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 79,028.85 Da | 35.36 | 105.46 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 456 | 676 | 1.99437E-128 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 139 | 433 | 2.51681E-96 | IPR044726 |
| Pfam | PF00664 | ABC transporter transmembrane region | 150 | 385 | 5.7E-33 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 475 | 623 | 1.5E-28 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 138 | 438 | 3.27E-49 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 3 | 48 | 3.2E-7 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 450 | 688 | 2.81E-67 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 102 | 439 | 4.6E-55 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 441 | 694 | 1.1E-80 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 66 | 6.4E-9 | IPR027417 |
| SMART | SM00382 | AAA_5 | 484 | 669 | 8.7E-12 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 458 | 692 | 16.526749 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 141 | 421 | 32.570984 | IPR011527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 109 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_021755169.1 | putative ABC transporter C family member 15 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R2A4 | ABC-type xenobiotic transporter OS=Spinacia oleracea OX=3562 GN=SOVF_114980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology