Basic Information
Locus ID:
gene:ENSEOMG00000047995
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UBC4
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 74851093 | 74855438 | - | gene:ENSEOMG00000047995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 17,923.50 Da | 54.83 | 78.01 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 142 | 3.93857E-51 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 10 | 140 | 2.4E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 4 | 140 | 1.57E-43 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 146 | 1.0E-46 | IPR016135 |
| SMART | SM00212 | ubc_7 | 4 | 148 | 1.5E-44 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 148 | 37.488514 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 73 | 89 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_022935460.1 | ubiquitin-conjugating enzyme E2 5-like isoform X2 [Cucurbita moschata] | 0 |
| P42749 | Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J1FAP9 | ubiquitin-conjugating enzyme E2 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442319 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology