Basic Information
Locus ID:
gene:ENSEOMG00000047874
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UBP16
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 69021226 | 69027581 | + | gene:ENSEOMG00000047874 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 84,082.94 Da | 54.53 | 75.00 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 223 | 527 | 1.54998E-136 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 224 | 526 | 1.8E-46 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 220 | 531 | 2.16E-85 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 217 | 538 | 6.3E-92 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 224 | 529 | 50.288712 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 225 | 240 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 770 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 581 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24560.1 | ubiquitin-specific protease 16. Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. | 0 |
| RefSeq | XP_021740339.1 | ubiquitin carboxyl-terminal hydrolase 16-like [Chenopodium quinoa] | 0 |
| Q9SB51 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana OX=3702 GN=UBP16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MEI2 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology