Basic Information
Locus ID:
gene:ENSEOMG00000047731
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6 | 62509574 | 62510230 | - | gene:ENSEOMG00000047731 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 23,408.84 Da | 19.53 | 111.10 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 52 | 90 | 1.5E-5 | IPR000225 |
| SUPERFAMILY | SSF48371 | ARM repeat | 2 | 213 | 2.42E-30 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 120 | 217 | 2.7E-13 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 119 | 5.0E-26 | IPR011989 |
| SMART | SM00185 | arm_5 | 10 | 50 | 0.25 | IPR000225 |
| SMART | SM00185 | arm_5 | 51 | 91 | 0.2 | IPR000225 |
| SMART | SM00185 | arm_5 | 130 | 170 | 130.0 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 21 | 63 | 8.8724 | IPR000225 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54850.1 | plant U-box 14. Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | 0 |
| RefSeq | XP_021717676.1 | U-box domain-containing protein 14 [Chenopodium quinoa] | 0 |
| Q8VZ40 | U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N122 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology