HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000047580
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
6 7342978 7346008 + gene:ENSEOMG00000047580
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.42 33,848.05 Da 39.39 76.22 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12274 Protein of unknown function (DUF3615) 28 118 4.1E-7 IPR022059
Pfam PF12274 Protein of unknown function (DUF3615) 194 279 3.6E-6 IPR022059
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021750014.1 uncharacterized protein LOC110715719 isoform X1 [Chenopodium quinoa] 0
TrEMBL A0A803M8X8 Phospholipid scramblase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 3 Ah000277, Ah000278, Ah024150
Amaranthaceae Beta vulgaris 3 BVRB_2g041740, BVRB_8g183620, BVRB_8g183640
Amaranthaceae Salicornia bigelovii 3 Sbi_jg55510, Sbi_jg61440, Sbi_jg62327
Amaranthaceae Salicornia europaea 4 Seu_jg193, Seu_jg26063, Seu_jg5922, Seu_jg899
Amaranthaceae Suaeda aralocaspica 3 GOSA_00013094, GOSA_00013095, GOSA_00014226
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000030096, gene:ENSEOMG00000031832 ...
gene:ENSEOMG00000034728, gene:ENSEOMG00000044390, gene:ENSEOMG00000047580
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.5AG0025560, CQ.Regalona.r1.5BG0025780 ...
CQ.Regalona.r1.5BG0025790, CQ.Regalona.r1.8BG0018140
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.