Basic Information
Locus ID:
gene:ENSEOMG00000047367
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 70900898 | 70904096 | + | gene:ENSEOMG00000047367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 65,271.93 Da | 43.37 | 72.50 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 429 | 560 | 1.128E-42 | IPR033734 |
| CDD | cd09612 | Jacalin | 188 | 316 | 9.06301E-36 | IPR033734 |
| CDD | cd09612 | Jacalin | 18 | 149 | 7.55259E-44 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 18 | 149 | 2.6E-34 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 429 | 560 | 1.5E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 188 | 316 | 6.7E-27 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 420 | 560 | 2.75E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 7 | 148 | 9.29E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 178 | 316 | 1.57E-35 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 416 | 560 | 2.6E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 149 | 1.5E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 169 | 316 | 4.4E-45 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 18 | 150 | 3.6E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 429 | 561 | 1.1E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 188 | 318 | 1.7E-33 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 418 | 561 | 49.717079 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 150 | 48.938606 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 177 | 318 | 42.748333 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021759624.1 | uncharacterized protein LOC110724509 [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG8 | Jacalin-related lectin 3-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology