Basic Information
Locus ID:
gene:ENSEOMG00000047171
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6 | 49450610 | 49469184 | - | gene:ENSEOMG00000047171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 100,762.22 Da | 40.27 | 88.95 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 707 | 880 | 3.35053E-57 | - |
| Pfam | PF06337 | DUSP domain | 18 | 120 | 5.7E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 292 | 879 | 1.4E-86 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 290 | 881 | 1.45E-106 | IPR038765 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 142 | 211 | 9.42E-5 | IPR029071 |
| SUPERFAMILY | SSF143791 | DUSP-like | 9 | 120 | 7.06E-25 | IPR035927 |
| Gene3D | G3DSA:3.10.20.90 | - | 133 | 217 | 9.9E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 275 | 518 | 1.3E-65 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 2 | 132 | 6.2E-35 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 686 | 889 | 1.6E-55 | - |
| SMART | SM00695 | dusp | 14 | 122 | 1.5E-27 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 1 | 119 | 17.914703 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 292 | 882 | 56.769058 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 293 | 308 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 824 | 841 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_021733328.1 | ubiquitin carboxyl-terminal hydrolase 5-like [Chenopodium quinoa] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KUF3 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology