Basic Information
Locus ID:
gene:ENSEOMG00000046763
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6 | 62435238 | 62436745 | - | gene:ENSEOMG00000046763 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 32,600.44 Da | 21.61 | 106.17 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 41 | 79 | 2.4E-5 | IPR000225 |
| SUPERFAMILY | SSF48371 | ARM repeat | 5 | 206 | 3.06E-27 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 110 | 205 | 3.7E-12 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 109 | 5.1E-24 | IPR011989 |
| SMART | SM00185 | arm_5 | 40 | 80 | 0.2 | IPR000225 |
| SMART | SM00185 | arm_5 | 1 | 39 | 55.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 119 | 159 | 98.0 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 10 | 52 | 8.7324 | IPR000225 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54850.1 | plant U-box 14. Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | 0 |
| RefSeq | XP_021717676.1 | U-box domain-containing protein 14 [Chenopodium quinoa] | 0 |
| Q8VZ40 | U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N122 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology