Basic Information
Locus ID:
gene:ENSEOMG00000046216
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 6891134 | 6898609 | - | gene:ENSEOMG00000046216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 77,267.41 Da | 35.64 | 80.21 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 253 | 303 | 2.36543E-21 | - |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 271 | 300 | 7.9E-6 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 314 | 648 | 3.5E-35 | IPR001525 |
| Pfam | PF01426 | BAH domain | 5 | 101 | 3.9E-8 | IPR001025 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 251 | 298 | 1.1E-7 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 143 | 650 | 2.36E-69 | IPR029063 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 92 | 3.1E-28 | IPR043151 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 466 | 617 | 5.3E-163 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 252 | 668 | 5.3E-163 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 129 | 232 | 6.1E-14 | - |
| SMART | SM00439 | BAH_4 | 1 | 107 | 6.6E-11 | IPR001025 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 315 | 647 | 3.6E-30 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 1 | 107 | 15.631654 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 143 | 658 | 45.637741 | IPR001525 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 254 | 302 | 9.028001 | IPR000953 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 277 | 297 | - | IPR023779 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 318 | 330 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 144 | 160 | 4.8E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 361 | 375 | 4.8E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 407 | 420 | 4.8E-12 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 241 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_021725769.1 | DNA (cytosine-5)-methyltransferase CMT2-like [Chenopodium quinoa] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L224 | Cytosine-specific methyltransferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology