HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000046206
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: F-box kelch-repeat protein At3g06240-like
Maps and Mapping Data
Chromosome Start End Strand ID
6 51474420 51475710 - gene:ENSEOMG00000046206
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.87 13,598.67 Da 38.39 95.93 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 10 52 4.7E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 63 1.3E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 12 50 1.1E-5 -
SMART SM00256 fbox_2 14 54 1.1E-6 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G11620.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_021761613.1 F-box/kelch-repeat protein At3g06240-like [Chenopodium quinoa] 0
TrEMBL A0A803L2L9 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 11 gene_16218, gene_16226, gene_2540, gene_2541, gene_2830 ...
gene_3299, gene_3300, gene_3301, gene_3302, gene_3303, gene_9796
Amaranthaceae Atriplex hortensis 8 Ah007104, Ah007689, Ah007690, Ah018643, Ah021126, Ah021127 ...
Ah034984, Ah034985
Amaranthaceae Salicornia bigelovii 6 Sbi_jg15003, Sbi_jg15004, Sbi_jg15099, Sbi_jg29991 ...
Sbi_jg30530, Sbi_jg55822
Amaranthaceae Salicornia europaea 2 Seu_jg26326, Seu_jg28588
Amaranthaceae Suaeda aralocaspica 3 GOSA_00020049, GOSA_00020050, GOSA_00020051
Amaranthaceae Suaeda glauca 10 Sgl01365, Sgl01366, Sgl06440, Sgl06519, Sgl06520, Sgl12989 ...
Sgl13021, Sgl18247, Sgl18249, Sgl18251
Amaranthaceae Chenopodium album 7 gene:ENSEOMG00000000314, gene:ENSEOMG00000003057 ...
gene:ENSEOMG00000017590, gene:ENSEOMG00000019675, gene:ENSEOMG00000021988, gene:ENSEOMG00000043234, gene:ENSEOMG00000046206
Amaranthaceae Chenopodium quinoa 10 CQ.Regalona.r1.2AG0015500, CQ.Regalona.r1.2AG0015510 ...
CQ.Regalona.r1.2AG0015520, CQ.Regalona.r1.2BG0017520, CQ.Regalona.r1.3AG0004930, CQ.Regalona.r1.3AG0006880, CQ.Regalona.r1.3AG0006920, CQ.Regalona.r1.3BG0004960, CQ.Regalona.r1.3BG0004970, CQ.Regalona.r1.3BG0006900
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.