Basic Information
Locus ID:
gene:ENSEOMG00000046138
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7 | 57519815 | 57526393 | + | gene:ENSEOMG00000046138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 55,394.68 Da | 43.34 | 95.01 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 4 | 40 | 2.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 277 | 480 | 6.0E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 140 | 156 | 1.9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 171 | 2.13E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 255 | 489 | 6.61E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 353 | 503 | 4.4E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 186 | 1.1E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 245 | 352 | 6.3E-40 | - |
| SMART | SM00220 | serkin_6 | 276 | 503 | 1.0E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 276 | 505 | 35.382362 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 399 | 411 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 282 | 304 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_021714851.1 | somatic embryogenesis receptor kinase 2 [Chenopodium quinoa] | 0 |
| Q94AG2 | Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8S0V6L7 | Somatic embryogenesis receptor kinase 2 OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A042305 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology