Basic Information
Locus ID:
gene:ENSEOMG00000045334
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6 | 948165 | 949632 | + | gene:ENSEOMG00000045334 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 16,815.03 Da | 56.79 | 82.72 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 60 | 103 | 4.38265E-18 | - |
| Pfam | PF13639 | Ring finger domain | 60 | 103 | 5.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 40 | 108 | 9.84E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 37 | 110 | 2.2E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 61 | 102 | 1.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 61 | 103 | 12.710573 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05810.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021723692.1 | RING-H2 finger protein ATL43-like, partial [Chenopodium quinoa] | 0 |
| Q5EAE9 | RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MPP2 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology