Basic Information
Locus ID:
gene:ENSEOMG00000045066
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 4642270 | 4644711 | - | gene:ENSEOMG00000045066 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.39 | 44,447.86 Da | 50.95 | 90.92 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 191 | 245 | 3.4E-7 | IPR032872 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 46 | 104 | 4.6E-13 | IPR025287 |
| Pfam | PF13639 | Ring finger domain | 336 | 378 | 1.5E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 328 | 382 | 1.03E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 298 | 383 | 2.8E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 336 | 377 | 2.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 336 | 378 | 12.002429 | IPR001841 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53110.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021764306.1 | putative RING-H2 finger protein ATL21A [Chenopodium quinoa] | 0 |
| P0CH01 | Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 | 0 | |
| TrEMBL | A0A803L2N9 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology