Basic Information
Locus ID:
gene:ENSEOMG00000044999
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 26614478 | 26616115 | + | gene:ENSEOMG00000044999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 51,621.74 Da | 34.84 | 103.21 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 96 | 138 | 3.90599E-29 | - |
| Pfam | PF04564 | U-box domain | 92 | 162 | 2.2E-21 | IPR003613 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 219 | 258 | 1.6E-10 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 302 | 340 | 4.8E-6 | IPR000225 |
| SUPERFAMILY | SSF48371 | ARM repeat | 188 | 466 | 5.76E-49 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 92 | 167 | 6.83E-31 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 263 | 368 | 2.5E-24 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 369 | 470 | 2.2E-13 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 172 | 262 | 7.9E-13 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 165 | 5.2E-31 | IPR013083 |
| SMART | SM00185 | arm_5 | 301 | 341 | 0.058 | IPR000225 |
| SMART | SM00185 | arm_5 | 260 | 300 | 0.38 | IPR000225 |
| SMART | SM00185 | arm_5 | 219 | 259 | 9.0E-6 | IPR000225 |
| SMART | SM00504 | Ubox_2 | 95 | 158 | 3.2E-35 | IPR003613 |
| SMART | SM00185 | arm_5 | 383 | 423 | 350.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 342 | 382 | 230.0 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 271 | 313 | 9.0474 | IPR000225 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 91 | 165 | 44.67255 | IPR003613 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 230 | 272 | 14.1924 | IPR000225 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54850.1 | plant U-box 14. Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. | 0 |
| RefSeq | XP_021726871.1 | U-box domain-containing protein 14-like [Chenopodium quinoa] | 0 |
| Q8VZ40 | U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NA48 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology