Basic Information
Locus ID:
gene:ENSEOMG00000044875
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 18753193 | 18755882 | - | gene:ENSEOMG00000044875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 41,984.33 Da | 42.01 | 108.09 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 49 | 88 | 1.8E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 46 | 91 | 6.41E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 347 | 1.06E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 47 | 90 | 1.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 326 | 5.5E-10 | IPR032675 |
| SMART | SM00256 | fbox_2 | 51 | 91 | 0.0024 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 45 | 95 | 11.670011 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52680.2 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021761777.1 | uncharacterized protein LOC110726612 [Chenopodium quinoa] | 0 |
| Q9LXJ6 | F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52680 PE=2 SV=2 | 0 | |
| TrEMBL | A0A484NH86 | F-box domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS42085 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 7 | Ah023203, Ah023944, Ah028596, Ah028601, Ah028833, Ah035632 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019563 |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000009927, gene:ENSEOMG00000016680 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0017870 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18895 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132613385, gene-LOC132622071, gene-LOC132636488 |