Basic Information
Locus ID:
gene:ENSEOMG00000044457
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 6867692 | 6870782 | - | gene:ENSEOMG00000044457 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 49,822.47 Da | 50.35 | 70.40 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 154 | 423 | 2.33829E-43 | - |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 170 | 228 | 2.2E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 300 | 338 | 0.016 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 388 | 423 | 8.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 253 | 287 | 4.2E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 135 | 423 | 1.97E-61 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 80 | 426 | 3.5E-127 | IPR015943 |
| SMART | SM00320 | WD40_4 | 206 | 244 | 0.47 | IPR001680 |
| SMART | SM00320 | WD40_4 | 341 | 381 | 170.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 248 | 287 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 164 | 203 | 1.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 384 | 423 | 6.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 296 | 338 | 4.5E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 391 | 424 | 10.416506 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 255 | 287 | 13.950525 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 171 | 212 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 171 | 203 | 9.99469 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 255 | 287 | 11.550137 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 391 | 424 | 12.513543 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 410 | 424 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_021762135.1 | cell division cycle 20.2, cofactor of APC complex-like [Chenopodium quinoa] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L226 | ANAPC4_WD40 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology