Basic Information
Locus ID:
gene:ENSEOMG00000044328
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 7208280 | 7209085 | - | gene:ENSEOMG00000044328 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 22,278.75 Da | 38.52 | 82.59 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 54 | 116 | 4.02371E-14 | IPR002048 |
| CDD | cd00051 | EFh | 130 | 192 | 1.92703E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 54 | 115 | 1.3E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 128 | 191 | 1.5E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 46 | 192 | 2.17E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 25 | 119 | 7.3E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 122 | 197 | 1.5E-22 | - |
| SMART | SM00054 | efh_1 | 54 | 82 | 8.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 130 | 158 | 5.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 166 | 194 | 5.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 90 | 118 | 0.04 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 86 | 121 | 11.919133 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 50 | 85 | 15.489744 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 162 | 197 | 12.867577 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 126 | 161 | 14.234451 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 99 | 111 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 175 | 187 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 63 | 75 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 139 | 151 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_021725829.1 | probable calcium-binding protein CML18 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M8U1 | Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KSR4 | Calcium-binding protein CML18 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology