Basic Information
Locus ID:
gene:ENSEOMG00000044067
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6 | 6337496 | 6340764 | - | gene:ENSEOMG00000044067 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 80,165.36 Da | 46.88 | 91.83 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 348 | 643 | 1.67078E-155 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 37 | 335 | 3.25838E-155 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 348 | 639 | 2.9E-24 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 348 | 644 | 5.49E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 36 | 335 | 5.23E-30 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 35 | 336 | 1.5E-26 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 347 | 645 | 4.0E-46 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 343 | 644 | 29.148788 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 37 | 336 | 25.811426 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58170.1 | SHV3-like 5. | 0 |
| RefSeq | XP_021741895.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Chenopodium quinoa] | 0 |
| Q9LVN0 | Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N884 | glycerophosphodiester phosphodiesterase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology