Basic Information
Locus ID:
gene:ENSEOMG00000043789
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 12893505 | 12895884 | + | gene:ENSEOMG00000043789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 45,842.25 Da | 49.64 | 81.10 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 114 | 383 | 2.4782E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 213 | 248 | 1.4E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 261 | 299 | 0.15 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 349 | 383 | 0.001 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 104 | 388 | 5.07E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 386 | 3.0E-114 | IPR015943 |
| SMART | SM00320 | WD40_4 | 209 | 248 | 1.8E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 167 | 205 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 164 | 0.0061 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 383 | 3.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 299 | 0.013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 302 | 342 | 29.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 132 | 173 | 9.97376 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 352 | 384 | 10.307941 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 352 | 384 | 8.676514 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 216 | 248 | 12.762857 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 216 | 248 | 15.487762 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 370 | 384 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_021752411.1 | cell division cycle 20.1, cofactor of APC complex-like [Chenopodium quinoa] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KU11 | ANAPC4_WD40 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology