Basic Information
Locus ID:
gene:ENSEOMG00000043390
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4 | 70882065 | 70885795 | - | gene:ENSEOMG00000043390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 64,799.47 Da | 49.54 | 83.12 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 361 | 395 | 2.8E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 444 | 479 | 5.4E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 270 | 581 | 7.61E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 248 | 584 | 2.2E-120 | IPR015943 |
| SMART | SM00320 | WD40_4 | 313 | 352 | 29.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 441 | 479 | 8.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 355 | 395 | 1.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 267 | 302 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 538 | 582 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 527 | 4.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 398 | 437 | 0.79 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 362 | 404 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 448 | 481 | 10.521959 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 448 | 481 | 12.647216 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 362 | 399 | 10.706503 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 466 | 480 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 466 | 480 | 2.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 382 | 396 | 2.1E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 339 | 353 | 2.1E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 219 | - | - |
| Coils | Coil | Coil | 60 | 80 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53090.4 | - | 0 |
| RefSeq | XP_021722829.1 | protein SPA1-RELATED 4-like isoform X1 [Chenopodium quinoa] | 0 |
| Q94BM7 | Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LVC8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology