Basic Information
Locus ID:
gene:ENSEOMG00000043365
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4 | 46282619 | 46295791 | + | gene:ENSEOMG00000043365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 37,026.03 Da | 39.08 | 93.25 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00983 | recA | 1 | 310 | 3.631E-174 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 1 | 255 | 4.7E-111 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 4 | 254 | 5.4E-50 | IPR027417 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 255 | 311 | 7.72E-18 | IPR023400 |
| Gene3D | G3DSA:3.40.50.300 | - | 22 | 318 | 5.2E-98 | IPR027417 |
| SMART | SM00382 | AAA_5 | 44 | 213 | 6.3E-7 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 1 | 310 | 4.6E-136 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 184 | 259 | 27.698118 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 23 | 179 | 26.166567 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 198 | 206 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 230 | 259 | 2.6E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 80 | 109 | 2.6E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 150 | 179 | 2.6E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 284 | 301 | 2.6E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 195 | 223 | 2.6E-59 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 2 | 316 | 41.532475 | IPR013765 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79050.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_021741976.1 | DNA repair protein recA homolog 1, chloroplastic [Chenopodium quinoa] | 0 |
| Q39199 | DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NA37 | DNA repair protein recA homolog 1, chloroplastic OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology