Basic Information
Locus ID:
gene:ENSEOMG00000043305
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Topless-related protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4 | 7310044 | 7315585 | - | gene:ENSEOMG00000043305 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 76,891.40 Da | 34.21 | 83.19 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 54 | 91 | 0.0014 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 486 | 519 | 0.049 | IPR001680 |
| SUPERFAMILY | SSF51004 | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 460 | 670 | 1.8E-15 | IPR011048 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 73 | 524 | 2.2E-42 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 17 | 309 | 4.4E-35 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 310 | 537 | 1.7E-23 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 538 | 678 | 1.4E-6 | IPR015943 |
| SMART | SM00320 | WD40_4 | 50 | 91 | 0.0023 | IPR001680 |
| SMART | SM00320 | WD40_4 | 437 | 477 | 2.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 183 | 223 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 625 | 666 | 79.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 569 | 611 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 9 | 44 | 13.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 137 | 180 | 89.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 480 | 519 | 6.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 93 | 134 | 0.036 | IPR001680 |
| SMART | SM00320 | WD40_4 | 392 | 434 | 230.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 57 | 100 | 8.837541 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 487 | 521 | 9.467419 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 201 | 232 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 487 | 528 | 11.778342 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 78 | 92 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 705 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 705 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27030.1 | TOPLESS-related 3. | 0 |
| RefSeq | XP_021742617.1 | topless-related protein 3-like [Chenopodium quinoa] | 0 |
| Q84JM4 | Topless-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=TPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNW6 | Topless-related protein 3-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology