Basic Information
Locus ID:
gene:ENSEOMG00000043234
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5 | 6593108 | 6594717 | + | gene:ENSEOMG00000043234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 33,893.54 Da | 32.39 | 103.62 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 51 | 2.0E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 103 | 259 | 1.11E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 68 | 6.41E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 51 | 3.9E-8 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 6.4E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 109 | 266 | 8.7E-12 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23880.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021725911.1 | F-box protein At3g07870-like [Chenopodium quinoa] | 0 |
| Q9LIR8 | F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R497 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 11 | gene_16218, gene_16226, gene_2540, gene_2541, gene_2830 ... |
| Amaranthaceae | Atriplex hortensis | 8 | Ah007104, Ah007689, Ah007690, Ah018643, Ah021126, Ah021127 ... |
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg15003, Sbi_jg15004, Sbi_jg15099, Sbi_jg29991 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg26326, Seu_jg28588 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00020049, GOSA_00020050, GOSA_00020051 |
| Amaranthaceae | Suaeda glauca | 10 | Sgl01365, Sgl01366, Sgl06440, Sgl06519, Sgl06520, Sgl12989 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000000314, gene:ENSEOMG00000003057 ... |
| Amaranthaceae | Chenopodium quinoa | 10 | CQ.Regalona.r1.2AG0015500, CQ.Regalona.r1.2AG0015510 ... |