Basic Information
Locus ID:
gene:ENSEOMG00000042965
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RNA polymerase II-associated protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4 | 75917619 | 75918899 | + | gene:ENSEOMG00000042965 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 49,265.49 Da | 27.77 | 81.34 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 51 | 1.0E-10 | IPR001810 |
| Pfam | PF07762 | Protein of unknown function (DUF1618) | 246 | 358 | 2.0E-6 | IPR011676 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 222 | 1.31E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 104 | 1.6E-8 | - |
| SMART | SM00256 | fbox_2 | 10 | 49 | 8.2E-8 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 50 | 8.755626 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53370.2 | - | 0 |
| RefSeq | XP_021755524.1 | putative F-box/kelch-repeat protein At4g22430 [Chenopodium quinoa] | 0 |
| Q9MAG5 | Putative F-box protein At1g53370 OS=Arabidopsis thaliana OX=3702 GN=At1g53370 PE=4 SV=2 | 0 | |
| TrEMBL | A0A803LYG6 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology