Basic Information
Locus ID:
gene:ENSEOMG00000042902
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 64576604 | 64581844 | + | gene:ENSEOMG00000042902 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 14,462.24 Da | 46.06 | 58.87 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 5 | 48 | 6.33169E-16 | - |
| Pfam | PF14599 | Zinc-ribbon | 52 | 109 | 1.4E-24 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 3 | 47 | 3.4E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 4 | 51 | 6.13E-13 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 75 | 119 | 1.1E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 71 | 2.1E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 5 | 47 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 5 | 48 | 12.017182 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62970.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_021730931.1 | E3 ubiquitin-protein ligase MIEL1-like isoform X2 [Chenopodium quinoa] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RX36 | RING finger and CHY zinc finger domain-containing protein 1 OS=Spinacia oleracea OX=3562 GN=SOVF_019950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology