Basic Information
Locus ID:
gene:ENSEOMG00000041460
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
transcriptional corepressor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 74221716 | 74229124 | + | gene:ENSEOMG00000041460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 43,144.94 Da | 59.27 | 62.42 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08513 | LisH | 10 | 35 | 9.7E-7 | IPR006594 |
| SMART | SM00667 | Lish | 8 | 40 | 0.0016 | IPR006594 |
| ProSiteProfiles | PS50896 | LIS1 homology (LisH) motif profile. | 8 | 40 | 9.40982 | IPR006594 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 396 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32700.6 | LEUNIG_homolog. Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. | 0 |
| RefSeq | XP_021763452.1 | transcriptional corepressor LEUNIG_HOMOLOG-like isoform X1 [Chenopodium quinoa] | 0 |
| O48847 | Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLJ2 | LisH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology