Basic Information
Locus ID:
gene:ENSEOMG00000040929
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 72765836 | 72773286 | - | gene:ENSEOMG00000040929 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 44,304.71 Da | 34.19 | 86.98 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 84 | 378 | 8.73939E-54 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 169 | 207 | 0.0021 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 82 | 119 | 1.7E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 300 | 336 | 0.0073 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 341 | 378 | 6.1E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 78 | 378 | 4.27E-66 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 218 | 393 | 6.2E-33 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 57 | 217 | 2.3E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 80 | 119 | 4.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 250 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 294 | 336 | 0.66 | IPR001680 |
| SMART | SM00320 | WD40_4 | 252 | 290 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 339 | 379 | 1.2E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 167 | 208 | 1.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 164 | 1.9E-5 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 346 | 378 | 11.233774 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 132 | 168 | 10.68014 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 346 | 378 | 13.549507 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 87 | 120 | 9.467419 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 132 | 173 | 13.415834 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 87 | 120 | 11.310488 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G43920.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_021763349.1 | WD repeat-containing protein 26-like [Chenopodium quinoa] | 0 |
| Q9FND4 | WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana OX=3702 GN=WDS PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LAD9 | WD repeat-containing protein 26 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology