Basic Information
Locus ID:
gene:ENSEOMG00000040251
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 27 | 34244876 | 34250222 | + | gene:ENSEOMG00000040251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 88,838.63 Da | 42.75 | 81.82 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 387 | 807 | 6.13574E-126 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 434 | 812 | 5.1E-82 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 380 | 805 | 8.37E-97 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 329 | 575 | 5.7E-46 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 686 | 810 | 1.8E-32 | - |
| SMART | SM00119 | hect_3 | 398 | 812 | 1.7E-85 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 513 | 812 | 55.436306 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 222 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_021753072.1 | E3 ubiquitin-protein ligase UPL3-like [Chenopodium quinoa] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LGE5 | HECT-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology