Basic Information
Locus ID:
gene:ENSEOMG00000039213
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Organic cation carnitine transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 78032627 | 78037000 | + | gene:ENSEOMG00000039213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 57,144.98 Da | 45.33 | 105.52 | 0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 76 | 510 | 9.5E-30 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 21 | 512 | 3.79E-64 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 32 | 515 | 3.2E-84 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 40 | 506 | 37.00555 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 382 | 397 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021761977.1 | organic cation/carnitine transporter 7-like isoform X1 [Chenopodium quinoa] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R628 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology