Basic Information
Locus ID:
gene:ENSEOMG00000039071
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 2596812 | 2598322 | + | gene:ENSEOMG00000039071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 29,806.26 Da | 48.12 | 59.03 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 1 | 130 | 1.1E-59 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 55 | 128 | 1.2E-33 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 1 | 54 | 1.6E-22 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 269 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.1 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_021716112.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like [Chenopodium quinoa] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology