Basic Information
Locus ID:
gene:ENSEOMG00000038529
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
neutrophil clearance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 8966230 | 8970259 | + | gene:ENSEOMG00000038529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 99,697.40 Da | 38.45 | 92.00 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 866 | 2.49744E-93 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 97 | 135 | 1.5E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 329 | 367 | 3.0E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 69 | 2.5E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 589 | 861 | 8.8E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 877 | 3.55E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 308 | 1.22E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 330 | 437 | 2.01E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 886 | 8.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 555 | 662 | 1.5E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 326 | 9.1E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 455 | 8.5E-30 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 142 | 167 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 214 | 0.39 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 117 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 393 | 417 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 4.7 | IPR003591 |
| SMART | SM00220 | serkin_6 | 585 | 867 | 9.8E-39 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 97 | 119 | 7.704254 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 867 | 40.343395 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 482 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021749640.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology