Basic Information
Locus ID:
gene:ENSEOMG00000038171
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 53064714 | 53081123 | + | gene:ENSEOMG00000038171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 90,908.48 Da | 33.20 | 84.19 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 258 | 313 | 1.0E-12 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 407 | 457 | 1.2E-13 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 473 | 514 | 6.1E-7 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 468 | 517 | 1.19E-13 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 699 | 790 | 9.25E-8 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 547 | 600 | 3.77E-6 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 461 | 542 | 1.3E-16 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 544 | 605 | 1.0E-9 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 693 | 795 | 1.6E-5 | - |
| SMART | SM00249 | PHD_3 | 546 | 603 | 0.0031 | IPR001965 |
| SMART | SM00249 | PHD_3 | 473 | 514 | 1.6E-10 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 471 | 516 | 10.1486 | IPR019787 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 544 | 605 | 8.5466 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 474 | 513 | - | IPR019786 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37520.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021716692.1 | uncharacterized protein LOC110684560 isoform X1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803N8F8 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology