Basic Information
Locus ID:
gene:ENSEOMG00000038115
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3 | 78412352 | 78419489 | + | gene:ENSEOMG00000038115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 29,068.89 Da | 56.92 | 95.95 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 66 | 114 | 3.55524E-18 | - |
| Pfam | PF12906 | RING-variant domain | 66 | 113 | 1.9E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 61 | 117 | 2.12E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 118 | 4.5E-17 | IPR013083 |
| SMART | SM00744 | ringv_2 | 65 | 114 | 1.3E-15 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 58 | 120 | 19.663385 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50440.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_021761923.1 | E3 ubiquitin-protein ligase MARCH8-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0J8BEF4 | RING-CH-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_4g093560 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology