HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000037695
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: Arm repeat protein interacting with
Maps and Mapping Data
Chromosome Start End Strand ID
26 18831119 18836825 + gene:ENSEOMG00000037695
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.28 74,349.36 Da 55.90 100.19 -0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18352 BTB_POZ_ARIA_plant 523 638 4.20869E-77 -
Pfam PF00514 Armadillo/beta-catenin-like repeat 224 263 1.6E-7 IPR000225
Pfam PF00514 Armadillo/beta-catenin-like repeat 186 221 6.1E-9 IPR000225
Pfam PF00651 BTB/POZ domain 529 631 2.9E-26 IPR000210
SUPERFAMILY SSF48371 ARM repeat 428 506 8.92E-7 IPR016024
SUPERFAMILY SSF48371 ARM repeat 43 408 2.62E-58 IPR016024
SUPERFAMILY SSF54695 POZ domain 527 630 4.97E-30 IPR011333
Gene3D G3DSA:1.25.10.10 - 422 515 1.4E-8 IPR011989
Gene3D G3DSA:1.25.10.10 - 267 421 7.4E-30 IPR011989
Gene3D G3DSA:1.25.10.10 - 36 167 2.5E-12 IPR011989
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 517 662 5.0E-42 IPR011333
Gene3D G3DSA:1.25.10.10 - 168 266 3.2E-30 IPR011989
SMART SM00185 arm_5 308 348 0.036 IPR000225
SMART SM00225 BTB_4 536 633 3.5E-24 IPR000210
SMART SM00185 arm_5 266 306 0.099 IPR000225
SMART SM00185 arm_5 83 132 4.0 IPR000225
SMART SM00185 arm_5 224 264 1.8E-6 IPR000225
SMART SM00185 arm_5 464 504 25.0 IPR000225
SMART SM00185 arm_5 182 222 5.4E-7 IPR000225
SMART SM00185 arm_5 349 389 0.054 IPR000225
SMART SM00185 arm_5 133 180 7.2E-5 IPR000225
SMART SM00185 arm_5 422 463 370.0 IPR000225
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 360 402 9.7474 IPR000225
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 193 228 13.7374 IPR000225
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 319 361 12.5124 IPR000225
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 94 145 8.8024 IPR000225
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 144 193 9.4324 IPR000225
ProSiteProfiles PS50097 BTB domain profile. 536 603 18.347979 IPR000210
ProSiteProfiles PS50176 Armadillo/plakoglobin ARM repeat profile. 235 277 9.9924 IPR000225
MobiDBLite mobidb-lite consensus disorder prediction 1 37 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 31 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19330.1 ARM repeat protein interacting with ABF2. Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. 0
RefSeq XP_021736256.1 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X1 [Chenopodium quinoa] 0
Swiss-Prot B9DHT4 ARM REPEAT PROTEIN INTERACTING WITH ABF2 OS=Arabidopsis thaliana OX=3702 GN=ARIA PE=1 SV=2 0
TrEMBL A0A803N4W8 BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg16125, jg8797
Aizoaceae Mesembryanthemum crystallinum 2 gene_15577, gene_5045
Amaranthaceae Atriplex hortensis 2 Ah020278, Ah030075
Amaranthaceae Beta vulgaris 1 BVRB_7g163130
Amaranthaceae Salicornia bigelovii 7 Sbi_jg10326, Sbi_jg16118, Sbi_jg23526, Sbi_jg5119 ...
Sbi_jg57047, Sbi_jg57168, Sbi_jg6900
Amaranthaceae Salicornia europaea 2 Seu_jg13145, Seu_jg24634
Amaranthaceae Suaeda aralocaspica 1 GOSA_00003890
Amaranthaceae Suaeda glauca 4 Sgl00078, Sgl05165, Sgl72016, Sgl75585
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000013730, gene:ENSEOMG00000031011 ...
gene:ENSEOMG00000031538, gene:ENSEOMG00000037695, gene:ENSEOMG00000042635
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.3AG0015080, CQ.Regalona.r1.3AG0015560 ...
CQ.Regalona.r1.3BG0014300, CQ.Regalona.r1.7AG0016930, CQ.Regalona.r1.7BG0017380
Anacardiaceae Pistacia vera 2 pistato.v30027170, pistato.v30237070
Apiaceae Apium graveolens 2 Ag2G02393, Ag9G02146
Arecaceae Cocos nucifera 2 COCNU_02G016940, COCNU_16G001330
Arecaceae Phoenix dactylifera 1 gene-LOC103723614
Asparagaceae Asparagus officinalis 1 AsparagusV1_07.1797.V1.1
Asteraceae Flaveria trinervia 2 Ftri10G19206, Ftri12G20753
Brassicaceae Arabidopsis thaliana 2 AT5G13060.1, AT5G19330.1
Brassicaceae Eutrema salsugineum 2 Thhalv10012773m.g.v1.0, Thhalv10012813m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp6g25080.v2.2, Sp6g30920.v2.2
Brassicaceae Brassica nigra 5 BniB02g043360.2N, BniB02g043420.2N, BniB02g049440.2N ...
BniB05g025160.2N, BniB08g009760.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq06G2070, Ceq06G2073, Ceq09G1320
Casuarinaceae Casuarina glauca 1 Cgl09G1410
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno04g04010, gene.Cymno05g03760
Dunaliellaceae Dunaliella salina 2 Dusal.0135s00028.v1.0, Dusal.1046s00001.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate04g23970, gene.Thate05g25980, gene.Thate09g10230
Nitrariaceae Nitraria sibirica 3 evm.TU.LG04.1070, evm.TU.LG07.220, evm.TU.LG11.1074
Plantaginaceae Plantago ovata 1 Pov_00008077
Plumbaginaceae Limonium bicolor 2 Lb4G24802, Lb8G36615
Poaceae Echinochloa crus-galli 4 AH05.2553, BH05.2648, BH08.2275, CH06.1521
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0374120, gene-QOZ80_5BG0422180
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.1HG0063780.1
Poaceae Lolium multiflorum 1 gene-QYE76_013381
Poaceae Oryza coarctata 2 Oco09G009450, Oco10G009180
Poaceae Oryza sativa 1 LOC_Os05g33050.1
Poaceae Paspalum vaginatum 2 gene-BS78_08G076500, gene-BS78_09G136000
Poaceae Puccinellia tenuiflora 2 Pt_Chr0505163, Pt_Chr0505419
Poaceae Sporobolus alterniflorus 6 Chr01G021030, Chr12G016930, Chr18G008580, Chr22G009030 ...
Chr24G011630, Chr29G012490
Poaceae Thinopyrum elongatum 1 Tel1E01G414200
Poaceae Triticum dicoccoides 2 gene_TRIDC1AG037460, gene_TRIDC1BG042510
Poaceae Triticum aestivum 3 TraesCS1A02G249400.1, TraesCS1B02G260100.1 ...
TraesCS1D02G248900.1
Poaceae Zea mays 2 Zm00001eb287530_P001, Zm00001eb349910_P001
Poaceae Zoysia japonica 2 nbis-gene-23773, nbis-gene-23774
Poaceae Zoysia macrostachya 1 Zma_g28198
Portulacaceae Portulaca oleracea 4 evm.TU.LG01.216, evm.TU.LG04.536, evm.TU.LG06.1719 ...
evm.TU.LG11.1072
Posidoniaceae Posidonia oceanica 1 gene.Posoc01g08150
Rhizophoraceae Bruguiera sexangula 2 evm.TU.Scaffold_5_RagTag.984, evm.TU.Scaffold_6_RagTag.722
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-15968
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-4151, nbisL1-mrna-5068
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-11598, nbisL1-mrna-604
Rhizophoraceae Kandelia candel 2 evm.TU.utg000006l.303, evm.TU.utg000011l.435
Rhizophoraceae Kandelia obovata 2 Maker00007486, Maker00014040
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-15338, nbisL1-mrna-9985
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-3450, nbisL1-mrna-7605
Salicaceae Populus euphratica 5 populus_peu07356, populus_peu15039, populus_peu21355 ...
populus_peu21356, populus_peu32700
Solanaceae Lycium barbarum 2 gene-LOC132608139, gene-LOC132610958
Solanaceae Solanum chilense 2 SOLCI002234300, SOLCI006754000
Solanaceae Solanum pennellii 2 gene-LOC107023416, gene-LOC107031538
Tamaricaceae Reaumuria soongarica 1 gene_4271
Tamaricaceae Tamarix chinensis 1 TC06G1228
Zosteraceae Zostera marina 2 Zosma01g37860.v3.1, Zosma02g23080.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.