Basic Information
Locus ID:
gene:ENSEOMG00000037168
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 27 | 28558564 | 28565712 | + | gene:ENSEOMG00000037168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 167,849.73 Da | 35.53 | 106.31 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 1251 | 1471 | 3.40607E-120 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 634 | 834 | 2.4512E-109 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 934 | 1228 | 2.23405E-91 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 321 | 608 | 5.55607E-104 | IPR044746 |
| Pfam | PF00664 | ABC transporter transmembrane region | 936 | 1176 | 1.1E-29 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 652 | 786 | 6.1E-21 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 319 | 587 | 3.5E-24 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1270 | 1418 | 1.1E-31 | IPR003439 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 933 | 1234 | 1.7E-52 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 308 | 620 | 1.01E-32 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1246 | 1480 | 1.24E-65 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 630 | 856 | 1.43E-56 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 620 | 869 | 1.0E-73 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 899 | 1234 | 2.7E-61 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1236 | 1489 | 2.6E-79 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 291 | 616 | 1.5E-48 | IPR036640 |
| SMART | SM00382 | AAA_5 | 661 | 834 | 4.7E-13 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1279 | 1471 | 2.4E-13 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 320 | 600 | 32.896122 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 936 | 1216 | 36.331951 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1253 | 1487 | 18.99439 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 634 | 857 | 22.835907 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 759 | 773 | - | IPR017871 |
| Coils | Coil | Coil | 481 | 501 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_021736749.1 | ABC transporter C family member 3-like [Chenopodium quinoa] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LN56 | ABC-type xenobiotic transporter OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology