Basic Information
Locus ID:
gene:ENSEOMG00000035988
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 24 | 36922109 | 36926198 | - | gene:ENSEOMG00000035988 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 38,168.93 Da | 54.43 | 85.87 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13925 | con80 domain of Katanin | 181 | 339 | 1.1E-47 | IPR028021 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 44 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61210.3 | - | 0 |
| RefSeq | XP_021740494.1 | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Chenopodium quinoa] | 0 |
| F4HTH8 | Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 OS=Arabidopsis thaliana OX=3702 GN=KTN80.2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LPQ0 | Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology