Basic Information
Locus ID:
gene:ENSEOMG00000035897
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Short Name:
UPL4
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 19604273 | 19607616 | - | gene:ENSEOMG00000035897 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 37,922.80 Da | 41.58 | 92.01 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 25 | 336 | 8.6734E-104 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 39 | 338 | 9.4E-78 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 40 | 331 | 1.83E-78 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 43 | 217 | 4.4E-30 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 85 | 182 | 4.4E-30 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 224 | 336 | 6.5E-34 | - |
| SMART | SM00119 | hect_3 | 7 | 338 | 5.9E-69 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 28 | 338 | 57.714912 | IPR000569 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_021751622.1 | E3 ubiquitin-protein ligase UPL4-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803N3U7 | HECT-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology