Basic Information
Locus ID:
gene:ENSEOMG00000035880
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 4191518 | 4203117 | - | gene:ENSEOMG00000035880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 129,256.40 Da | 42.31 | 77.35 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 40 | 163 | 4.52528E-41 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 181 | 509 | 6.01263E-168 | - |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 870 | 1080 | 4.7E-58 | IPR029346 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 183 | 504 | 1.1E-45 | IPR001394 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 608 | 860 | 1.4E-76 | IPR024729 |
| Pfam | PF00917 | MATH domain | 45 | 165 | 7.8E-20 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 36 | 169 | 2.94E-41 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 178 | 535 | 1.22E-97 | IPR038765 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 37 | 179 | 7.6E-53 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 786 | 883 | 4.0E-28 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 668 | 785 | 3.4E-43 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 180 | 508 | 7.8E-90 | - |
| SMART | SM00061 | math_3 | 40 | 144 | 1.1E-22 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 38 | 163 | 39.593636 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 183 | 507 | 40.203407 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 184 | 199 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 423 | 440 | - | IPR018200 |
| Coils | Coil | Coil | 516 | 547 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_021720606.1 | ubiquitin carboxyl-terminal hydrolase 12 [Chenopodium quinoa] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LXJ5 | ubiquitinyl hydrolase 1 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology