Basic Information
Locus ID:
gene:ENSEOMG00000035844
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 9362403 | 9363790 | - | gene:ENSEOMG00000035844 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 13,763.80 Da | 43.54 | 88.32 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 52 | 114 | 2.1E-10 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 53 | 117 | 2.08E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 43 | 119 | 1.0E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 54 | 113 | 2.2E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 54 | 114 | 11.486073 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44330.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021740138.1 | E3 ubiquitin-protein ligase Praja-2-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MHY3 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah021863, Ah023740, Ah023745 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000035844, gene:ENSEOMG00000040256 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1AG0010870 |