Basic Information
Locus ID:
gene:ENSEOMG00000035824
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 6465830 | 6472673 | + | gene:ENSEOMG00000035824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 168,486.27 Da | 37.20 | 106.61 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 637 | 837 | 3.44268E-107 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1261 | 1481 | 2.0792E-123 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 944 | 1238 | 8.40672E-90 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 323 | 611 | 1.08983E-98 | IPR044746 |
| Pfam | PF00005 | ABC transporter | 1280 | 1428 | 4.7E-28 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 956 | 1190 | 8.0E-32 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 655 | 789 | 1.3E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 325 | 590 | 2.5E-28 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 943 | 1243 | 1.44E-48 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 633 | 853 | 5.12E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 310 | 611 | 3.66E-36 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1255 | 1493 | 5.62E-66 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 907 | 1244 | 1.3E-54 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 289 | 620 | 9.5E-53 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 635 | 866 | 8.4E-69 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1246 | 1499 | 3.8E-79 | IPR027417 |
| SMART | SM00382 | AAA_5 | 664 | 837 | 1.9E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1289 | 1481 | 5.1E-13 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 946 | 1226 | 32.375137 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 325 | 603 | 36.00111 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1263 | 1497 | 16.373356 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 637 | 860 | 21.715466 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 762 | 776 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 914 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 876 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 876 | 914 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_021755169.1 | putative ABC transporter C family member 15 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LIL0 | ABC-type xenobiotic transporter OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology