Basic Information
Locus ID:
gene:ENSEOMG00000035807
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 3093744 | 3095927 | - | gene:ENSEOMG00000035807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 41,161.54 Da | 51.29 | 79.65 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 317 | 359 | 1.85571E-15 | - |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 155 | 226 | 2.0E-7 | IPR032872 |
| Pfam | PF13639 | Ring finger domain | 316 | 359 | 1.7E-13 | IPR001841 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 26 | 93 | 1.8E-14 | IPR025287 |
| SUPERFAMILY | SSF57850 | RING/U-box | 311 | 362 | 2.1E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 278 | 364 | 1.1E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 317 | 358 | 2.6E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 317 | 359 | 12.267982 | IPR001841 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25410.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021760307.1 | putative RING-H2 finger protein ATL21A [Chenopodium quinoa] | 0 |
| Q9SKK8 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803M4U4 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology