HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000035544
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: F-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
25 4042994 4044906 + gene:ENSEOMG00000035544
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.27 26,936.63 Da 41.02 88.40 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 94 163 4.8E-5 IPR013187
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 1 197 1.6E-18 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021760399.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
TrEMBL A0A803KZX3 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg23251, jg23288, jg37094, jg37095
Aizoaceae Mesembryanthemum crystallinum 2 gene_1584, gene_1585
Amaranthaceae Atriplex hortensis 1 Ah022754
Amaranthaceae Beta vulgaris 1 BVRB_1g001600
Amaranthaceae Salicornia bigelovii 3 Sbi_jg3775, Sbi_jg49024, Sbi_jg49025
Amaranthaceae Salicornia europaea 1 Seu_jg6211
Amaranthaceae Suaeda aralocaspica 2 GOSA_00000697, GOSA_00000698
Amaranthaceae Suaeda glauca 4 Sgl10781, Sgl10782, Sgl16134, Sgl16135
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000013327, gene:ENSEOMG00000015097 ...
gene:ENSEOMG00000032818, gene:ENSEOMG00000035544, gene:ENSEOMG00000046314
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.1AG0001420, CQ.Regalona.r1.1AG0001450 ...
CQ.Regalona.r1.2BG0027160, CQ.Regalona.r1.2BG0027170
Anacardiaceae Pistacia vera 1 pistato.v30034350
Asteraceae Flaveria trinervia 2 Ftri11G01651, Ftri11G32655
Casuarinaceae Casuarina glauca 1 Cgl04G2741
Nitrariaceae Nitraria sibirica 1 evm.TU.LG06.1349
Plantaginaceae Plantago ovata 9 Pov_00001400, Pov_00021844, Pov_00021845, Pov_00021847 ...
Pov_00021850, Pov_00021851, Pov_00033121, Pov_00037659, Pov_00037931
Portulacaceae Portulaca oleracea 3 evm.TU.LG19.1356, evm.TU.LG24.1353, evm.TU.LG24.1354
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_8_RagTag.495
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-9765
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2231
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-18080
Rhizophoraceae Kandelia candel 1 evm.TU.utg000018l.678
Rhizophoraceae Kandelia obovata 1 Maker00003551
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-9609
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-18671
Salicaceae Populus euphratica 1 populus_peu16562
Solanaceae Lycium barbarum 1 gene-LOC132610478
Solanaceae Solanum chilense 1 SOLCI004042200
Solanaceae Solanum pennellii 1 gene-LOC107031639
Tamaricaceae Reaumuria soongarica 1 STRG.10190_chr06_-
Tamaricaceae Tamarix chinensis 1 TC09G2412
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.