Basic Information
Locus ID:
gene:ENSEOMG00000035044
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 9790829 | 9791858 | - | gene:ENSEOMG00000035044 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 11,994.77 Da | 34.27 | 90.86 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 28 | 71 | 3.50611E-17 | - |
| Pfam | PF13639 | Ring finger domain | 28 | 71 | 5.5E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 9 | 80 | 1.03E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 79 | 1.2E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 29 | 70 | 2.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 29 | 71 | 12.725326 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021743613.1 | RING-H2 finger protein ATL54-like [Chenopodium quinoa] | 0 |
| Q9LF64 | RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LUT7 | RING-type E3 ubiquitin transferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology