Basic Information
Locus ID:
gene:ENSEOMG00000034444
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
LON peptidase N-terminal domain and RING finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 9569177 | 9571000 | - | gene:ENSEOMG00000034444 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 30,588.58 Da | 66.36 | 72.85 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 226 | 263 | 2.07376E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 225 | 267 | 2.5E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 225 | 270 | 6.36E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 198 | 274 | 3.2E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 226 | 263 | 2.1E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 226 | 264 | 10.984472 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 209 | - | - |
| Coils | Coil | Coil | 196 | 217 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13100.4 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021720045.1 | uncharacterized protein LOC110687733 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9R914 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_092810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology