Basic Information
Locus ID:
gene:ENSEOMG00000034435
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Replication factor A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 25 | 20042943 | 20044093 | - | gene:ENSEOMG00000034435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 20,545.61 Da | 51.55 | 92.10 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04476 | RPA1_DBD_C | 78 | 161 | 1.32023E-18 | IPR013955 |
| Pfam | PF08646 | Replication factor-A C terminal domain | 77 | 164 | 8.3E-16 | IPR013955 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 76 | 164 | 7.71E-18 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 33 | 177 | 5.8E-25 | - |
KEGG Pathway
KO Term:
Pathway:
ko03030 (DNA replication)
map03030 (DNA replication)
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko03430 (Mismatch repair)
map03430 (Mismatch repair)
ko03440 (Homologous recombination)
map03440 (Homologous recombination)
ko03460 (Fanconi anemia pathway)
map03460 (Fanconi anemia pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021851438.1 | uncharacterized protein LOC110790987 [Spinacia oleracea] | 0 |
| TrEMBL | A0A445DFD0 | Rep_fac-A_C domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g019107 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology