Basic Information
Locus ID:
gene:ENSEOMG00000034296
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Autophagy-related protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 26 | 13108405 | 13115683 | - | gene:ENSEOMG00000034296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 41,757.71 Da | 48.28 | 81.77 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 267 | 297 | 0.0099 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 53 | 311 | 6.41E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 53 | 375 | 2.4E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 214 | 254 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 40 | 79 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 298 | 0.033 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.3 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_021775441.1 | autophagy-related protein 18a-like [Chenopodium quinoa] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MPI0 | Autophagy-related protein 18a-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology